Table 1

CPU time to query the fifteen million conformer database with a single conformer

Method
CPU Time (min.)



Average
Minimum
Maximum

ROCS
136
113
216
AR-0.73 (Total)a
1.28
0.33
3.32
AR-0.73 (Screening part)
1.11
0.17
3.13
AR-0.74 (Screening part)
0.65
0.15
1.85
AR-0.75 (Screening part)
0.38
0.11
1.15
Query vs. 5 534 AR Reference Shapes
0.17
0.12
0.27

a Total time includes screening plus the required 5 534 initial alignments between reference shapes and the query.

Fontaine et al. Chemistry Central Journal 2007 1:12   doi:10.1186/1752-153X-1-12

Open Data